Building a blood cancer treatment from the ground up

National Stem Cell Foundation of Australia

Mark Dawson has helped to build a new drug to fight an aggressive form of blood cancer, discovering the basic science of gene expression in acute myeloid leukaemia (AML), developing the drug to block that action, and leading an international clinical trial to test it.

Mark first explored how genes function in leukaemia, then identified molecules that interrupt the key genetic instructions that perpetuate cancer cells. The drug subsequently developed to treat AML is now the subject of more than 50 clinical trials around the world.

“Each year, more than 1,000 Australians are diagnosed with AML, and more than seventy per cent of these people will die within five years,” says Mark.

“By studying the differences and commonalities between healthy blood stem cells and leukaemia stem cells, I hope to help develop less toxic, more targeted drug treatments that will see more of my patients live longer and healthier lives.”

Professor Mark Dawson is a clinician-scientist at the Peter MacCallum Cancer Centre. He is the program head of the Translational Haematology Program, Group leader of the Cancer Epigenetics Laboratory and Consultant Haematologist in the Department of Haematology.

In recognition of his leadership in stem cell research, Mark Dawson has received one of two $50,000 Metcalf Prizes from the National Stem Cell Foundation of Australia.

Mark began his scientific research career exploring the fundamental importance of chromatin—our DNA and its molecular ‘packaging’. If you think of genes as the instructions for our biology, then aspects of chromatin can determine how those instructions are read and turned into actions—how DNA is accessed for the expression of genes, for DNA replication or for the repair of damaged DNA.

Following a degree in medicine and surgery, Mark specialised in haematology, the branch of medicine that focuses on conditions of the blood.

He later undertook PhD research at the University of Cambridge, where he discovered that a mutated enzyme present in virtually everyone with the blood disorder polycythemia vera can potentiate the maintenance of this malignancy by going into the nucleus and modifying chromatin to directly increase the expression of genes that sustain the cancer cells.

Mark wanted to further explore how changes or mutations in the proteins that regulate the structure and function of chromatin can induce or maintain diseases, including other blood cancers.

Mark turned his attention to AML, an aggressive type of cancer that affects the blood and bone marrow. AML has a poor prognosis, develops quickly and needs urgent treatment.

It occurs when abnormal immature white blood cells multiply rapidly and spill into the blood stream, eventually crowding out healthy blood cells leading to life threatening complications including bleeding and infection. While many in number, these immature white blood cells provide little immunity against bacteria and viruses.

“My research became more translational. I wanted to know how we might use some of these fundamental discoveries to design drugs. This led to a collaboration with the pharmaceutical company GlaxoSmithKline, where we developed one of the first molecules to be able to interrupt a key interaction at the DNA interface that drives gene expression in cancer cells.”

This led a new ‘BET inhibitor’ drug developed to suppress the growth of these abnormal cells in the treatment of AML.

“If there’s a single achievement I’m most proud of, it’s taking something right from basic discovery to helping with the characterisation of a drug, and seeing that drug transition into the clinic.”

Mark returned to Australia with his family in 2014 to take up a dual role as a consultant haematologist and cancer epigenetics research group leader at the Peter MacCallum Cancer Centre in Melbourne.

“I have patients here at Peter Mac that have gone on to this clinical trial for this drug that I helped develop from the ground up. The fact that this work has provided some of my patients with meaningful clinical responses is a very rewarding experience.”

Mark will travel to Atlanta next month to report the full results of his international Phase I clinical trial, establishing the safety of the drug, at the American Society of Hematology Annual Meeting. The drug has now transitioned to a Phase II trial led by Mark at the Peter MacCallum Cancer Centre.

How chemistry in a pub changed a medical science career path

Mark was originally accepted into the University of Cambridge PhD program straight out of medical school. But he met his future wife, a fellow medical student, at a pub in Bourke Street and decided to stay in Melbourne and train as a haematologist instead.

“In retrospect, that was the wisest decision I made. If I had gone straight from medical school into my PhD I probably wouldn’t have ever become a practicing clinician,” Mark explains.

“That decision to stay has informed and directed every question I ask in my research. I understand what the major limitations are in the clinical arena and I use those insights to drive my research. I wouldn’t have had that perspective if I hadn’t trained as a doctor.”

Ten years later he moved with his wife to the United Kingdom where they both embarked on their PhDs together.

Understanding resistance and improving surveillance to outsmart cancer

Returning to Australia, Mark realised he had an ideal research collaborator close to hand. Mark’s wife Associate Professor Sarah-Jane Dawson is a breast cancer oncologist and cancer genomics researcher. Despite parallel careers as clinician-researchers, their move to Peter Mac became the first time they had worked in the same building.

“Sarah and I decided to join forces and share our individual expertise towards our common goal of a more complete understanding of cancer biology. She brings to the table substantial skills in cancer genomics, and my skill set has been the understanding of the function biology of cancer development and stem cells.”

In a major 2015 Nature paper, they described a possible process cancer cells can use to evade treatment, challenging the idea that the only way drug resistance develops is through ongoing mutations in our DNA. Mark, Sarah-Jane and their colleagues provided the evidence that resistance to therapies develops from cancer stem cells. This knowledge will help researchers optimise the effectiveness of new drugs.

“Cancer is selfish. It is driven by a fundamental ambition to survive. It does whatever it takes to ensure that it gets the bulk of the nutrients and the best potential to expand, and it ignores the normal constraints that other normal cells adhere to.”

“Whilst doing that it needs to evade the immune recognition of rogue cancer cells we have evolved to protect ourselves from cancer.”

Mark has already drawn on Sarah-Jane’s expertise in detecting and gaining valuable diagnostic information from the tiny fragments of DNA cancer cells shed into a patient’s bloodstream. They’ve developed simple blood tests that can be used as an alternative to invasive and painful bone marrow biopsies to help diagnose and monitor blood cancer treatment.

Mark now plans to delve deeper into how cancer cells hide from the surveillance, further explore the key differences in stem cell behaviour in normal blood formation and leukaemia, find potential drugs that throw a chemical spanner in the works of malignant cell renewal, and translate this body of knowledge to treatments ready for the clinic.

Mark says winning the 2017 Metcalf Prize for Stem Cell Research is a wonderful way to be recognised by the academic community.

“I’ve not been back in Australia for very long and I’m probably better known overseas, so I relish the opportunity to meet the local scientific environment and integrate into it. I hope winning the Metcalf Prize will raise my profile within the Australian research community so that I can work more closely with people at home.”

Qualifications

2010                        Doctor of Philosophy, University of Cambridge

2007                        FRACP & FRCPA, Royal Australasian College of Physicians & Pathologists

1999                        Bachelor of Medicine, Bachelor of Surgery, University of Melbourne

Career Highlights, Awards, Fellowships, Grants

2017-19                NHMRC Project Grant #APP1128984 (CIA). Clonal Evolution in Myelodysplasia and Acute Myeloid Leukaemia following Azacitidine

2017                        Elected a Fellow of the   Australian Academy of Health and Medical Sciences

2017                        Howard Hughes Medical Institute International Research Scholar

2016                        Joseph Sambrook Prize for Research Excellence Awarded to the investigators who made the most ground breaking discovery at the Peter MacCallum Cancer Centre

2016-2020          NHMRC Project Grant NHMRC Project Grant #1106447 (CIA). Epigenetic regulation of self renewal and lineage commitment in haematopoiesis

2016-19                NHMRC Project Grant #1106444 (CIA). Epigenetic therapies as molecular probes to investigate the molecular pathogenesis of leukaemia

2015-18                NHMRC Project Grant #1085015 (CIA). Modelling BET inhibitor resistance in Acute Myeloid Leukaemia

2014-17                NHMRC Project Grant #1066545 (CIA). Novel combinations of targeted therapy for the treatment of MLL leukaemia

2014                      veski innovation fellowship

2010-14                Wellcome Trust – Beit Intermediate Clinical Fellowship

2010                        Inaugural Wellcome-Beit Prize. Awarded annually to the top ranked career development fellow in Britain.

2009                        Cambridge Institute for Medical Research PhD Prize

2006                        General Sir John Monash Scholar

2006                        Cambridge Australia Trust Scholar

2006                        HSANZ Young Investigator Award

Key Publications

Marian L. Burr*, Christina E. Sparbier, Yih-Chih Chan, James C. Williamson, Katherine Woods, Paul A. Beavis, Enid Y. N. Lam, Melissa A. Henderson, Charles C. Bell, Sabine Stolzenburg, Omer Gilan, Stuart Bloor, Tahereh Noori, David Morgens, Michael C. Bassik, Paul J. Neeson, Andreas Behren, Phillip K. Darcy, Sarah-Jane Dawson, Ilia Voskoboinik, Joseph A. Trapani, Jonathan Cebon, Paul J Lehner* & Mark A. Dawson *– “CMTM6 maintains the expression of PD-L1 and regulates anti-tumour immunity “ – Nature; 2017 Sep 7;549(7670):101-105.(*equal corresponding authors)

Dean S. Tyler, Johanna Vappiani, Tatiana Cañeque, Enid Y. N. Lam, Aoife Ward, Omer Gilan, Yih-Chih Chan, Antje Hienzsch, Anna Rutkowska, Thilo Werner, Anne J. Wagner, Dave Lugo, Richard Gregory, Cesar Ramirez Molina, Neil Garton, Christopher R. Wellaway, Susan Jackson, Laura MacPherson, Margarida Figueiredo, Sabine Stolzenburg, Charles C. Bell, Colin House, Sarah-Jane Dawson, Edwin D. Hawkins, Gerard Drewes, Rab K. Prinjha, Raphaël Rodriguez, Paola Grandi* & Mark A. Dawson* – “Click Chemistry Enables Preclinical Evaluation of Targeted Epigenetic Therapies” – Science; 2017 Jun 30;356 (6345):1397-1401.(*equal corresponding authors)

Chun Yew Fong, Omer Gilan, Enid Lam, Alan F. Rubin, Sarah Ftouni, Dean Tyler, Kym Stanley, Devbarna Sinha, Paul Yeh, Jessica Morison, George Giotopoulos, Dave Lugo, Philip Jeffrey, Stanley Chun-Wei Lee, Christopher Carpenter, Richard Gregory, Robert G. Ramsay, Steven W. Lane, Omar Abdel-Wahab, Tony Kouzarides, Ricky Johnstone, Sarah-Jane Dawson, Brian J. P. Huntly, Rab K. Prinjha, Anthony T. Papenfuss & Mark A. Dawson* – “BET inhibitor resistance emerges from leukaemia stem cells” – Nature; 2015 Sep 24;525(7570):538-42

Mark A. Dawson*, Rab K. Prinjha, Antje Dittman, George Giotopoulos, Marcus Bantscheff, Wai-In Chan, Samuel C Robson, Chun-wa Chung, Carsten Hopf, Mikhail M. Savitski, Carola Huthmacher, Emma Gudgin, Dave Lugo, Soren Beinke, Trevor D. Chapman, Emma J. Roberts, Peter E Soden, Kurt R. Auger, Olivier Mirguet, Konstanze Doehner, Ruud Delwel, Alan K. Burnett, Phillip Jeffrey, Gerard Drewes, Kevin Lee, Brian J.P Huntly* & Tony Kouzarides* – “Inhibition of BET recruitment to chromatin as an effective treatment for MLL-fusion leukaemia” – Nature; 2011 Oct 2;478(7370): 529-33 (*equal corresponding authors)

Mark A. Dawson, Andrew J Bannister, Berthold Göttgens, Till Bartke, Samuel D. Foster, Anthony R Green & Tony Kouzarides – “JAK2 phosphorylates histone H3Y41 and excludes HP1alpha from chromatin” – Nature; 2009 Oct 8;461(7265):819-22